Glasser50 Parcellation

In osl-dynamics, this parcellation file is named atlas-Glasser_nparc-50_space-MNI_res-8x8x8.nii.gz, however, this parcellation file was previously named Glasser50_binary_space-MNI152NLin6_res-8x8x8.nii.gz (both names will work).

This is a reduced version of the Glasser52 parcellation.

Parcels

Labels and MNI coordinates:

Index	Parcel	Hemisphere	X	Y	Z
0	Primary and Early Visual Cortex	right	14.1	-81.3	1.0
1	Dorsal Stream Visual Cortex	right	18.7	-81.6	32.8
2	Ventral Stream Visual Cortex	right	29.3	-57.3	-16.4
3	MT+ Complex and Neighboring Visual Areas	right	43.7	-72.1	-0.7
4	Somatosensory and Motor Cortex	right	37.3	-21.9	51.1
5	Supplementary Motor Area	right	13.1	-1.0	64.1
6	Cingulate Motor Areas & Area 5	right	8.0	-30.7	53.3
7	Premotor Cortex	right	42.8	1.2	40.6
8	Insular & Frontoparietal Operculum	right	40.7	1.2	2.9
9	Early Auditory Cortex	right	46.3	-23.3	12.2
10	Auditory Association Cortex	right	55.6	-12.3	-7.1
11	Medial Temporal Cortex	right	27.6	-21.6	-24.5
12	Lateral Temporal Cortex	right	48.1	-14.5	-26.8
13	Temporal-Parieto-Occipital Junction	right	54.9	-47.0	12.6
14	Medial Bank of the Intra-parietal Sulcus	right	29.6	-51.6	44.6
15	Superior Medial Parietal Cortex	right	18.4	-58.2	59.6
16	Inferior Parietal Cortex Task-Positive Network	right	57.4	-29.4	35.4
17	Inferior Parietal Cortex Task-Negative Network	right	47.6	-57.9	35.2
18	Intraparietal Sulcus & PGP	right	36.1	-71.9	32.0
19	Posterior Cingulate Cortex	right	8.9	-55.8	27.7
20	Anterior Cingulate and Medial Prefrontal Cortex	right	5.1	34.4	15.2
21	Orbital and Polar Frontal Cortex	right	18.2	46.9	-12.3
22	Inferior Frontal Cortex	right	45.1	33.1	2.4
23	Inferior Dorso-Lateral Prefrontal Cortex	right	36.8	37.5	25.6
24	Superior Dorso-Lateral Prefrontal Cortex	right	20.4	32.9	46.1
25	Primary and Early Visual Cortex	left	-14.4	-82.3	1.3
26	Dorsal Stream Visual Cortex	left	-21.4	-83.4	30.0
27	Ventral Stream Visual Cortex	left	-34.2	-57.8	-17.4
28	MT+ Complex and Neighboring Visual Areas	left	-47.4	-70.9	-1.9
29	Somatosensory and Motor Cortex	left	-36.4	-24.7	52.7
30	Supplementary Motor Area	left	-13.2	-2.0	63.8
31	Cingulate Motor Areas & Area 5	left	-10.6	-28.8	52.1
32	Premotor Cortex	left	-43.7	-0.8	42.7
33	Insular & Frontoparietal Operculum	left	-43.7	-0.2	3.1
34	Early Auditory Cortex	left	-49.2	-25.9	10.6
35	Auditory Association Cortex	left	-58.0	-14.4	-7.0
36	Medial Temporal Cortex	left	-30.7	-22.7	-24.4
37	Lateral Temporal Cortex	left	-51.5	-17.5	-25.4
38	Temporal-Parieto-Occipital Junction	left	-57.3	-51.8	13.9
39	Medial Bank of the Intra-parietal Sulcus	left	-32.7	-52.2	43.0
40	Superior Medial Parietal Cortex	left	-19.4	-59.7	57.7
41	Inferior Parietal Cortex Task-Positive Network	left	-59.5	-35.0	33.7
42	Inferior Parietal Cortex Task-Negative Network	left	-47.6	-64.0	34.4
43	Intraparietal Sulcus & PGP	left	-37.4	-72.1	31.3
44	Posterior Cingulate Cortex	left	-8.7	-52.3	29.7
45	Anterior Cingulate and Medial Prefrontal Cortex	left	-6.1	35.1	12.0
46	Orbital and Polar Frontal Cortex	left	-20.9	45.3	-10.3
47	Inferior Frontal Cortex	left	-47.2	29.3	4.7
48	Inferior Dorso-Lateral Prefrontal Cortex	left	-39.8	36.7	24.6
49	Superior Dorso-Lateral Prefrontal Cortex	left	-23.1	30.2	47.3

Example Code

Example code for plotting with this parcellation:

from osl_dynamics.analysis import power

power.save(
    ...,
    mask_file="MNI152_T1_8mm_brain.nii.gz",
    parcellation_file="atlas-Glasser_nparc-50_space-MNI_res-8x8x8.nii.gz",
    filename="map_.png",
)