Glasser52 Parcellation

In osl-dynamics, this parcellation file is named atlas-Glasser_nparc-52_space-MNI_res-8x8x8.nii.gz, however, this parcellation file was previously named Glasser52_binary_space-MNI152NLin6_res-8x8x8.nii.gz (both names will work).

This parcellation was based on the HCP-MMP atlas.

Parcels

Labels and MNI coordinates:

Index.	Parcel	Hemisphere	X	Y	Z
0	Primary and Early Visual Cortex	right	14.5	-80.5	-0.4
1	Dorsal Stream Visual Cortex	right	19.4	-81.4	30.6
2	Ventral Stream Visual Cortex	right	29.9	-57.6	-17.7
3	MT+ Complex and Neighboring Visual Areas	right	42.2	-71.5	0.0
4	Superior Somatosnesory and Motor Cortex	right	23.6	-29.5	61.0
5	Inferior Somatosnesory and Motor Cortex	right	49.1	-13.4	38.3
6	Supplementory Motor Area	right	12.7	-2.2	62.9
7	Cingulate Motor Areas & Area 5	right	10.0	-31.2	53.6
8	Premotor Cortex	right	40.9	0.9	41.1
9	Insular & Frontoparietal Operculum	right	37.7	1.6	4.0
10	Early Auditory Cortex	right	40.2	-27.5	13.5
11	Auditory Association Cortex	right	55.0	-14.0	-6.5
12	Medial Temporal Cortex	right	25.0	-22.1	-22.1
13	Lateral Temporal Cortex	right	48.5	-16.3	-25.3
14	Temporal-Parieto-Occipital Junction	right	52.1	-48.1	12.3
15	Medial Bank of the Intra-parietal Sulcus	right	29.5	-51.0	43.0
16	Superior Medial Parietal Cortex	right	19.1	-58.4	59.6
17	Inferior Parietal Cortex Task-Positive Network	right	56.7	-29.7	35.7
18	Inferior Parietal Cortex Task-Negative Network	right	47.4	-56.1	35.8
19	Intraparietal Sulcus & PGP	right	36.5	-71.1	32.6
20	Posterior Cingulate Cortex	right	10.3	-55.1	26.8
21	Anterior Cingulate and Medial Prefrontal Cortex	right	6.1	33.8	14.2
22	Orbital and Polar Frontal Cortex	right	17.1	47.0	-11.6
23	Inferior Frontal Cortex	right	45.4	32.5	3.8
24	Inferior Dorso-Lateral Prefrontal Cortex	right	34.8	37.1	25.7
25	Superior Dorso-Lateral Prefrontal Cortex	right	21.0	31.9	45.9
26	Primary and Early Visual Cortex	left	-16.9	-82.0	-0.9
27	Dorsal Stream Visual Cortex	left	-21.7	-84.3	27.0
28	Ventral Stream Visual Cortex	left	-34.5	-56.0	-18.6
29	MT+ Complex and Neighboring Visual Areas	left	-45.2	-70.3	-1.4
30	Superior Somatosnesory and Motor Cortex	left	-22.6	-30.4	62.8
31	Inferior Somatosnesory and Motor Cortex	left	-48.3	-18.7	41.7
32	Supplementory Motor Area	left	-14.0	-2.7	62.7
33	Cingulate Motor Areas & Area 5	left	-14.4	-30.6	49.7
34	Premotor Cortex	left	-40.3	-1.7	43.8
35	Insular & Frontoparietal Operculum	left	-41.3	0.1	3.7
36	Early Auditory Cortex	left	-45.4	-29.4	12.1
37	Auditory Association Cortex	left	-55.3	-17.3	-7.8
38	Medial Temporal Cortex	left	-27.9	-22.2	-22.6
39	Lateral Temporal Cortex	left	-49.6	-17.9	-25.1
40	Temporal-Parieto-Occipital Junction	left	-53.1	-54.0	14.5
41	Medial Bank of the Intra-parietal Sulcus	left	-31.1	-50.0	41.1
42	Superior Medial Parietal Cortex	left	-21.3	-60.5	58.2
43	Inferior Parietal Cortex Task-Positive Network	left	-56.6	-36.3	36.6
44	Inferior Parietal Cortex Task-Negative Network	left	-45.1	-63.4	35.2
45	Intraparietal Sulcus & PGP	left	-36.7	-70.0	30.4
46	Posterior Cingulate Cortex	left	-11.6	-49.5	28.0
47	Anterior Cingulate and Medial Prefrontal Cortex	left	-8.7	32.0	11.4
48	Orbital and Polar Frontal Cortex	left	-21.9	46.3	-8.1
49	Inferior Frontal Cortex	left	-45.1	28.2	7.7
50	Inferior Dorso-Lateral Prefrontal Cortex	left	-37.2	36.2	25.2
51	Superior Dorso-Lateral Prefrontal Cortex	left	-23.5	28.6	45.7

Example Code

Example code for plotting with this parcellation:

from osl_dynamics.analysis import power

power.save(
    ...,
    mask_file="MNI152_T1_8mm_brain.nii.gz",
    parcellation_file="atlas-Glasser_nparc-52_space-MNI_res-8x8x8.nii.gz",
    filename="map_.png",
)

Reference

If you use the this parcellation, please cite:

Kohl, O., Woolrich, M., Nobre, A. C., & Quinn, A. (2023). Glasser52: A parcellation for MEG-Analysis [Data set]. Zenodo. https://doi.org/10.5281/zenodo.10401793