Schaefer100 Parcellation#
This parcellation is a volumetric version of the Schaefer 100-parcel cortical parcellation from Schaefer et al. (2018). The parcels are derived from resting-state fMRI functional connectivity gradients.
Parcels#
Labels and MNI coordinates:
Index |
Parcel |
Hemisphere |
X |
Y |
Z |
|---|---|---|---|---|---|
0 |
Visual 1 |
left |
-26.0 |
-32.0 |
-20.0 |
1 |
Visual 2 |
left |
-28.1 |
-74.7 |
-12.7 |
2 |
Visual 3 |
left |
-15.8 |
-60.8 |
-6.8 |
3 |
Visual 4 |
left |
-27.6 |
-94.3 |
-4.2 |
4 |
Visual 5 |
left |
-6.0 |
-92.8 |
-2.5 |
5 |
Visual 6 |
left |
-12.9 |
-63.1 |
5.3 |
6 |
Visual 7 |
left |
-46.0 |
-71.1 |
12.0 |
7 |
Visual 8 |
left |
-25.5 |
-88.5 |
20.5 |
8 |
Visual 9 |
left |
-7.3 |
-81.1 |
25.3 |
9 |
Somatomotor 1 |
left |
-51.2 |
-23.2 |
7.6 |
10 |
Somatomotor 2 |
left |
-38.0 |
-22.0 |
16.0 |
11 |
Somatomotor 3 |
left |
-54.4 |
-12.7 |
13.8 |
12 |
Somatomotor 4 |
left |
-54.6 |
-8.9 |
33.1 |
13 |
Somatomotor 5 |
left |
-40.6 |
-23.0 |
59.1 |
14 |
Somatomotor 6 |
left |
-12.2 |
-27.3 |
63.8 |
15 |
Dorsal Attention Posterior 1 |
left |
-47.3 |
-55.5 |
-12.8 |
16 |
Dorsal Attention Posterior 2 |
left |
-57.0 |
-25.5 |
38.5 |
17 |
Dorsal Attention Posterior 3 |
left |
-24.6 |
-67.8 |
49.0 |
18 |
Dorsal Attention Posterior 4 |
left |
-39.1 |
-34.6 |
49.1 |
19 |
Dorsal Attention Posterior 5 |
left |
-6.7 |
-62.0 |
56.7 |
20 |
Dorsal Attention Posterior 6 |
left |
-23.7 |
-52.3 |
66.3 |
21 |
Dorsal Attention Precentral Ventral 1 |
left |
-48.7 |
6.0 |
28.0 |
22 |
Dorsal Attention Frontal Eye Field 1 |
left |
-25.7 |
-4.3 |
59.1 |
23 |
Salience/Ventral Attention Parietal Operculum 1 |
left |
-57.7 |
-38.0 |
29.3 |
24 |
Salience/Ventral Attention Frontal Operculum/Insula 1 |
left |
-41.0 |
-1.5 |
-5.5 |
25 |
Salience/Ventral Attention Frontal Operculum/Insula 2 |
left |
-38.7 |
11.5 |
6.5 |
26 |
Salience/Ventral Attention Lateral Prefrontal Cortex 1 |
left |
-29.4 |
43.6 |
29.1 |
27 |
Salience/Ventral Attention Medial 1 |
left |
-6.4 |
21.8 |
32.0 |
28 |
Salience/Ventral Attention Medial 2 |
left |
-11.1 |
-34.4 |
45.8 |
29 |
Salience/Ventral Attention Medial 3 |
left |
-7.7 |
3.7 |
62.9 |
30 |
Limbic Orbitofrontal Cortex 1 |
left |
-16.0 |
30.5 |
-20.2 |
31 |
Limbic Temporal Pole 1 |
left |
-32.8 |
-0.6 |
-34.6 |
32 |
Limbic Temporal Pole 2 |
left |
-56.1 |
-29.1 |
-24.0 |
33 |
Control Parietal 1 |
left |
-37.0 |
-54.0 |
46.0 |
34 |
Control Lateral Prefrontal Cortex 1 |
left |
-43.3 |
32.2 |
21.0 |
35 |
Control Precuneus 1 |
left |
-10.4 |
-73.6 |
38.2 |
36 |
Control Cingulate 1 |
left |
-6.0 |
-28.0 |
32.0 |
37 |
Default Mode Temporal 1 |
left |
-54.5 |
-2.2 |
-20.2 |
38 |
Default Mode Temporal 2 |
left |
-55.3 |
-30.4 |
-1.8 |
39 |
Default Mode Parietal 1 |
left |
-56.9 |
-51.1 |
10.9 |
40 |
Default Mode Parietal 2 |
left |
-47.1 |
-63.3 |
35.4 |
41 |
Default Mode Prefrontal Cortex 1 |
left |
-35.6 |
22.0 |
-9.6 |
42 |
Default Mode Prefrontal Cortex 2 |
left |
-45.5 |
34.5 |
-0.9 |
43 |
Default Mode Prefrontal Cortex 3 |
left |
-6.4 |
46.8 |
-2.4 |
44 |
Default Mode Prefrontal Cortex 4 |
left |
-23.0 |
60.3 |
-2.7 |
45 |
Default Mode Prefrontal Cortex 5 |
left |
-10.7 |
44.7 |
40.2 |
46 |
Default Mode Prefrontal Cortex 6 |
left |
-41.2 |
12.7 |
48.5 |
47 |
Default Mode Prefrontal Cortex 7 |
left |
-25.2 |
18.5 |
51.7 |
48 |
Default Mode Precuneus/Posterior Cingulate 1 |
left |
-12.0 |
-55.0 |
12.0 |
49 |
Default Mode Precuneus/Posterior Cingulate 2 |
left |
-7.9 |
-52.1 |
32.0 |
50 |
Visual 1 |
right |
31.0 |
-29.3 |
-21.7 |
51 |
Visual 2 |
right |
27.9 |
-63.5 |
-12.2 |
52 |
Visual 3 |
right |
48.5 |
-60.2 |
-10.5 |
53 |
Visual 4 |
right |
22.9 |
-93.3 |
-4.2 |
54 |
Visual 5 |
right |
7.9 |
-77.7 |
4.5 |
55 |
Visual 6 |
right |
17.1 |
-55.9 |
5.2 |
56 |
Visual 7 |
right |
36.9 |
-82.4 |
17.1 |
57 |
Visual 8 |
right |
12.9 |
-85.3 |
29.8 |
58 |
Somatomotor 1 |
right |
53.3 |
-16.3 |
6.0 |
59 |
Somatomotor 2 |
right |
40.5 |
-14.7 |
13.8 |
60 |
Somatomotor 3 |
right |
58.0 |
-5.0 |
11.0 |
61 |
Somatomotor 4 |
right |
58.0 |
-4.8 |
28.9 |
62 |
Somatomotor 5 |
right |
46.6 |
-10.6 |
50.3 |
63 |
Somatomotor 6 |
right |
38.8 |
-22.0 |
60.8 |
64 |
Somatomotor 7 |
right |
33.0 |
-37.0 |
63.0 |
65 |
Somatomotor 8 |
right |
10.2 |
-24.0 |
66.0 |
66 |
Dorsal Attention Posterior 1 |
right |
50.6 |
-62.3 |
16.3 |
67 |
Dorsal Attention Posterior 2 |
right |
51.1 |
-23.1 |
41.7 |
68 |
Dorsal Attention Posterior 3 |
right |
38.4 |
-44.7 |
49.3 |
69 |
Dorsal Attention Posterior 4 |
right |
26.5 |
-66.4 |
50.4 |
70 |
Dorsal Attention Posterior 5 |
right |
13.4 |
-52.1 |
65.5 |
71 |
Dorsal Attention Precentral Ventral 1 |
right |
48.6 |
9.7 |
27.8 |
72 |
Dorsal Attention Frontal Eye Field 1 |
right |
28.4 |
-4.0 |
60.0 |
73 |
Salience/Ventral Attention Temporal-Occipital-Parietal 1 |
right |
58.0 |
-42.0 |
13.1 |
74 |
Salience/Ventral Attention Temporal-Occipital-Parietal 2 |
right |
60.4 |
-25.3 |
27.8 |
75 |
Salience/Ventral Attention Frontal Operculum/Insula 1 |
right |
41.7 |
7.8 |
0.0 |
76 |
Salience/Ventral Attention Medial 1 |
right |
10.0 |
-30.7 |
45.8 |
77 |
Salience/Ventral Attention Medial 2 |
right |
7.3 |
6.1 |
52.4 |
78 |
Limbic Orbitofrontal Cortex 1 |
right |
12.4 |
37.3 |
-19.3 |
79 |
Limbic Temporal Pole 1 |
right |
37.8 |
0.4 |
-35.6 |
80 |
Control Parietal 1 |
right |
57.3 |
-40.0 |
42.7 |
81 |
Control Parietal 2 |
right |
44.5 |
-62.5 |
46.0 |
82 |
Control Lateral Prefrontal Cortex 1 |
right |
30.2 |
56.8 |
-2.5 |
83 |
Control Lateral Prefrontal Cortex 2 |
right |
45.8 |
38.6 |
15.6 |
84 |
Control Lateral Prefrontal Cortex 3 |
right |
31.1 |
44.9 |
29.8 |
85 |
Control Lateral Prefrontal Cortex 4 |
right |
44.4 |
15.6 |
46.0 |
86 |
Control Cingulate 1 |
right |
3.8 |
-28.2 |
32.9 |
87 |
Control Medial Posterior Prefrontal Cortex 1 |
right |
4.3 |
25.6 |
32.4 |
88 |
Control Precuneus 1 |
right |
9.2 |
-62.8 |
42.7 |
89 |
Default Mode Parietal 1 |
right |
55.1 |
-50.6 |
31.4 |
90 |
Default Mode Temporal 1 |
right |
61.9 |
-25.6 |
-17.5 |
91 |
Default Mode Temporal 2 |
right |
52.2 |
5.1 |
-16.9 |
92 |
Default Mode Temporal 3 |
right |
58.4 |
-26.4 |
-1.8 |
93 |
Default Mode Ventral Prefrontal Cortex 1 |
right |
35.5 |
27.5 |
-14.5 |
94 |
Default Mode Ventral Prefrontal Cortex 2 |
right |
51.3 |
28.1 |
0.4 |
95 |
Default Mode Dorsal/Medial Prefrontal Cortex 1 |
right |
5.2 |
47.1 |
0.0 |
96 |
Default Mode Dorsal/Medial Prefrontal Cortex 2 |
right |
11.5 |
44.7 |
40.4 |
97 |
Default Mode Dorsal/Medial Prefrontal Cortex 3 |
right |
27.6 |
22.0 |
51.6 |
98 |
Default Mode Precuneus/Posterior Cingulate 1 |
right |
12.0 |
-56.0 |
17.0 |
99 |
Default Mode Precuneus/Posterior Cingulate 2 |
right |
4.9 |
-51.7 |
32.0 |
Example Code#
Example code for plotting with this parcellation:
from osl_dynamics.analysis import power
power.save(
...,
mask_file="MNI152_T1_8mm_brain.nii.gz",
parcellation_file="atlas-Schaefer_nparc-100_space-MNI_res-8x8x8.nii.gz",
filename="map_.png",
)
Reference#
If you use this parcellation, please cite:
Schaefer, A., Kong, R., Gordon, E. M., Laumann, T. O., Zuo, X.-N., Holmes, A. J., Eickhoff, S. B., & Yeo, B. T. T. (2018). Local-Global Parcellation of the Human Cerebral Cortex from Intrinsic Functional Connectivity MRI. Cerebral Cortex, 28(9), 3095-3114. https://doi.org/10.1093/cercor/bhx179